Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913018.1_cds_XP_016463108.1_56256
CDS Infomation

[gene=LOC107786170] [db_xref=GeneID:107786170] [protein=receptor-like serine/threonine-protein kinase SD1-7] [protein_id=XP_016463108.1] [location=join(27702..27703,30166..30446,30537..31331,32193..32336,32787..32941,33035..33205,33353..33398,33520..33754,33845..33995,34107..34403)] [gbkey=CDS]
Sequence

ATGGATGGCAAGACATTAGTTTCGTCCAACCAAAGATTTGAAATGGGATTTTTTGGTTCT
ACTACACCATCTCGACACACAAGGTACCTGGGATTGTGGTACAAGAGTATAGAGTCTGGT
ATAATATGGGTTGGCAATAGATTGAATCCACTTGGACATGGTGCAAGGCTTGTATTCAAT
GCACAAGGATTCATTTTTCTCCAAGATGATACAGGAAAGAAGGTACGGATTTATACGCCA
AAACAGATTGTTCTCTGGCCAGTTTTGCAGCTCCTAGATTCAGGAATGAAGCTTGGTTGG
GACCCGAAAACTGGTCTTAACCCAGCCATGAATTCCTGGAGGACAAGTGATGATCCAGCT
CCTGGTGAGTATTTCTTCAGGTTAGAGTCAGGTGAGTCAGGTCAGTCACTCCAACTAGTT
CTTGAGAAAAAACAGCAAAGAGCTTCAAGGTGGGGTCCTTGGGATGGACAAATATTCAGT
GGCGGTGATGCCCTCATGGACGACCTGGTACTCAGACCAGTATTTAACTCCAAAACTGGT
GCATTTTATGTTACATTTGAAGCCAAGAACGACAGCAGATTGAAACTGTCACTGAATCCA
GAGGGCAAGATACAGTTCCTGAAATGGACAAATGCCACTGGCTGGATTCAAGTGAAGGTC
CTGAATAAGGACATATGTGACAATTATAGGACTTGTGGGCCTTATGGAGTTTGTTTCGTT
GAGAATCCATCCTGCCGGTGTCCTGATGGTTTCACGGCTACATCACCAGATGACTGGGAC
AAGATGGATTATACCAACGGATGTAGGAGAATGACTCCTCTTAATTATACTGATAAAGAT
GTGTTTGTGAAGAATACTGGACTGAAGTTGCCTGATAATGCAACTTACTGGGGAATGTTG
TCCCCCAAGGAGTGTGGAGAGAAATGCTTGAATGAAAGATCGTGCATGGCTTATACTAAC
ATCAATATCAACAGAAATGGCAGCAAATGTTTCGTTTGGTTGGGAGATTTACTTGATATG
AGACGTTCGGAAAAAGCTGGGAATGACATCTATATACGGATGACACACGGAAGACTAGAA
GCAGCTGTTGCCCATGGGAAAAGGAAAAGGAAAATGAAAACGAAATGGATAATATGTGTT
TCTTTAACCTCAATGCTGGCACTTCTTATCTTGTCTCTACATTATCAGGTCCGGCGTCAT
GCAACAAAGACAGATGTGCTAGATGAACCACAAATTAATCAGCCTGGAAACTCTGTAGAA
GCTTTGCTGCAGGGCGCAGATGTCATTGCATATGATTACAGTGCTCTATCTGCAGCCACT
AACAATTTCTCGCTGTCTAATAAGATAGGGAATGGTGGATTTGGCAATGTTTATAAGGGT
GTATTAGATACTGGAGAAGAAATAGCAGTGAAGAAGCAGGAAGTGACTTCACGTCAAGAA
CGAGGAGATAAGGAGTTTGAGAATGAAGTCAAATTAATAGCAAAGCTTCAGCATCGTAAC
CTAACCAAGTTATTGGGATACTGCATTCATGGAAACGAAAAGTTCCTGGTCTATGAGTTC
ATGGCCAATAATAGCCTCGACAAGGTCATATTTGATTCTGCAAGAAGGGGTACAGTAACA
TGGCCAATGCGCTTTAACATTATTAAAGGAATTGCAAAAGGATTAGTTTACTTGCATCAT
GATTCGAGGTTGACAATAATCCACCGAGACTTAAAAGCTAGCAATGTCTTGCTAGACAGA
GAGATGACACCCAAAATATCTGACTTTGGGTTGTCAAGGGCTTTTGAAGATGATGTTGAA
GAAAAGACTCAGTATGTAGTTGGAACACGTGGTTATATGCCACCTGAATACTTAGAAGAT
GGACATTATTCAACAAAATCAGATGTGTTTAGCTTTGGAATTTTGGCATTGGAGATTGTC
AGTGGCCAAAAGAATTGGGGTTATCACCACCCAGGCTATGATATTGGTCTAGTAGGCTAT
GCTTGGAAAATTTGGAATGAAGGGAAGGCCATAGAACTATTGGATCCAATGATAGAACAA
TCAGGCAATAGGAATGAAGTTTTACAATGCATCCTTGTTGGGCTCTTGTGTTGTCAACGA
CGTGTCCAAGACAGACCTTCAATGGTTCAGGTGTTTTCCATACTAGAACAGAATGAAACT
TCAAGGTTAAATTGTGTGCCAGTGGAACCTTACATCCCTAGAGAGTGGAGTAACAGTTTC
AGGAGTCGCGACAGTGTGAATGGGGTAACTATTACTGAACTCACTGGAAGATCATGA

Peptide Sequence

PEP ID

XP_016463108.1
PEP Infomation

PREDICTED: receptor-like serine/threonine-protein kinase SD1-7 [Nicotiana tabacum]
Sequence

MDGKTLVSSNQRFEMGFFGSTTPSRHTRYLGLWYKSIESGIIWVGNRLNPLGHGARLVFN
AQGFIFLQDDTGKKVRIYTPKQIVLWPVLQLLDSGMKLGWDPKTGLNPAMNSWRTSDDPA
PGEYFFRLESGESGQSLQLVLEKKQQRASRWGPWDGQIFSGGDALMDDLVLRPVFNSKTG
AFYVTFEAKNDSRLKLSLNPEGKIQFLKWTNATGWIQVKVLNKDICDNYRTCGPYGVCFV
ENPSCRCPDGFTATSPDDWDKMDYTNGCRRMTPLNYTDKDVFVKNTGLKLPDNATYWGML
SPKECGEKCLNERSCMAYTNININRNGSKCFVWLGDLLDMRRSEKAGNDIYIRMTHGRLE
AAVAHGKRKRKMKTKWIICVSLTSMLALLILSLHYQVRRHATKTDVLDEPQINQPGNSVE
ALLQGADVIAYDYSALSAATNNFSLSNKIGNGGFGNVYKGVLDTGEEIAVKKQEVTSRQE
RGDKEFENEVKLIAKLQHRNLTKLLGYCIHGNEKFLVYEFMANNSLDKVIFDSARRGTVT
WPMRFNIIKGIAKGLVYLHHDSRLTIIHRDLKASNVLLDREMTPKISDFGLSRAFEDDVE
EKTQYVVGTRGYMPPEYLEDGHYSTKSDVFSFGILALEIVSGQKNWGYHHPGYDIGLVGY
AWKIWNEGKAIELLDPMIEQSGNRNEVLQCILVGLLCCQRRVQDRPSMVQVFSILEQNET
SRLNCVPVEPYIPREWSNSFRSRDSVNGVTITELTGRS

Transcript Sequence

Gene sequence data has not been registered.